YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33086678
Protein type:	Globular with Signal Peptide
Type Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRGVRVLE LAGLAPGPFC GMILADFGAE VVLVDRLGSV NHPSHLARGK RSLALDLKRS  60
   61 PGAAVLRRMC ARADVLLEPF RCGVMEKLQL GPETLQQDNP KLIYARLSGF GQSGIFSKVA 120
  121 GHDINYVALS GVLSKIGRSG ENPYPPLNLL ADFGGGGLMC TLGILLALFE RTRSGLGQVI 180
  181 DANMLPFVID LELPSNDPSK LSIGGGFQPV EQVLKDTKEG RIHGSHWMHE TADNSKRYVT 240
  241 VSYLDVATYK IYKLDTVEGT AYLSTFLWKT QAMGLWAQPR GQNLLDGGAP FYTTYKTADG 300
  301 EFMAVGAIEP QFYTLLLKGL GLESEELPSQ MSIEDWPEVK KKFADVFARK TKAEWCQIFD 360
  361 GTDACVTPVL TLEEALHHQH NRERGSFITD EEQHASPRPA PQLSRTPAVP SAKRDPSVGE 420
  421 HTVEVLKDYG FSQEEIHQLH SDRIIESNKL KANL

Type	Start	End	Confidence
Signal Peptide	1	25	0.39
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	454	0.78