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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32492568, gi|...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRIATKTWH VQVLFVYSVP GSSALFAGVP AALLHALVLW LLSSVEAIAT LLSLVLYSFH  60
   61 DASSVHSCQV IPSEADSGFV NYIKAMIWEK ELLLKGDLNH SEADELGAKQ ALALGAYRLL 120
  121 ISPRWGVYRK EGGTQDPNNI KYLGVTLTKQ VKDLYNKNFK TLKKEIEEDL RRWKDLPCSW 180
  181 IGRINIVKMP ILPKAIYRFN AIPIKIPIQF FKELDRTICK FIWNNKKPRI AKAILNNKRT 240
  241 SGGITIPELK QYYRAIAIKT AWYWYRDRQI DQWNRIEDPE MNPHTYGHLI FDKGAKTIQW 300
  301 KKDSIFSKWC WFNWRSTCRR MQIDPCLSPC TKLKSKWIKD LHIKADTLKL IEEKLGKHLE 360
  361 HMGTGKNFLN KTPMAYALRS RIDKWDLIKL QSFCKAKDTV VRTNRQPTDW EKIFTNPTTD 420
  421 RGLISKIYKE LKKLDRRETN NPIKKWGSEL NKEFTAEECR MAEKHLKKCS TSLVIREMQI 480
  481 KTTLRFHLTP VRMAKIKNSD DSRCWRGCGE RGTLLHCWWG CKLVQPFWKS VWRILRKLDI 540
  541 ELPEDPAIPL LGIYPKDAPT YKKDTCSTMF IAALFIIARS WKEPRCPSTE EWIQKMWYIY 600
  601 TMEYYSAIKN NDFMKFVGKW LELENIILSE LTQSQKDIHD MSKQAFVFPG VSATAYVSLE 660
  661 AESKKPLEAF TVCLYAHADV SRSFSIFSYA TKTSFNEILL FWTRGQGFSI AVGGPEILFS 720
  721 ASEIPEVPTH ICATWESATG IVELWLDGKP RVRKSLQKGY IVGTNASIIL GQEQDSYGGG 780
  781 FDANQSLVGD IGDVNMWDFV LSPEQINAVY VGRVFSPNVL NWRALKYETH GDVFIKPQLW 840
  841 PLTDCSQVQV GQRPPHKTDT LKLIEEKVGK NLGHMGTGPH EAQEGKTKVW MLQSFLEGGT 900
  901 KILTGGNMER KCGIEERPSR DCPTWGSSPH SATKPRQHCG YQEVHADRNL IQLSPERLCQ 960
  961 SLTNTEVDAH SQPLTEKEVP NGGVREKTEG VEGVCNPIRR TVSSNQPYPV RDPRD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle