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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086610
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLRWLPLL GQLLLLWPLA ARPASPIRAF VVPHSHMDVG WVYTVQESMR AYAANVYTTV  60
   61 VEELVRGRQR RFIAVEQEFF RLWWDGVASE QQKQQTAHAE DSEEPPGAHH LRVPAMGDCC 120
  121 IDSQMWSGNY FMGLQFMNKQ VRQLLDEGRL EFVLGGQVMH DEAVTHLDDQ ILQLTEGHGF 180
  181 LYETFGIRPQ FSWHVDPFGA SATTPTLFAL AGFNAHLISR IDYDLKDAMQ EAQQHVALVA 240
  241 PGLGDSNRGG DTRSLRKKPK GLQFVWHGSP SLSEQQEIYT HVMDLYSYCT PSHIPFSNRS 300
  301 GFYWNGVAVF PEPPPDGVYP NMSEPVTVDN IHLYAEALVA NVKQRAAWFR TPHVLWPWGC 360
  361 DKQFFNASVQ FDNMDPLLEY INNRSAQFGI SVQYATLNDY FQALHDFNVT WDIRDHHDFL 420
  421 PYSSGRSEDT ASAPWLVEVW EPSSLAVGTL MVLLYQAGTV TPPVPTRSAP RYREGTQLPY 480
  481 HQAEPQQAWT GFFTSRSTLK GLARQASALL YAGESMFTRY MWPHPRGTLD PTWALQQLQQ 540
  541 LRWAVSEVQH HDAITGTESP KVKNMYMEHL SMGMRGVHKL MASIALDRPP GSGTDTRPVG 600
  601 YSASVYNPLA WKITTIITLT VAFPSVSVTD ELGRPVSAQC TYAKVLSVLK THCNRGAKVG 660
  661 IQNSTKDPSA YDLLILTTIP GLSYRHYKVR RTRGDQAGTR ELVTPRANTL KFSRKLRNQT 720
  721 SQEGKLLVPV MNDCYTLLFD QDTNMLHSIQ DRQSNRTVHM TQEFLEYRAN GDVKQGPISD 780
  781 NYLFASNDTA EPSWEAVGME MVVGTLATDV RQYFYRNITD QGYIYSIHTR LAHVHPSLAG 840
  841 ELLCRRIEQQ YQVGPLDLNR EAILRTSSDL NSQQVLYSDN NGYQMQRRPY KAFKSNPIPR 900
  901 NYYPMVQSAF IEDDKSRLVL LAERPHGVSS QENGQVEVRE AWLSPYGPSK PPAAGPEPRK 960
  961 DRFPQVMLHR RLWNNLVWDL NYNLTLNDTS VVHPVLWLLL GPKSTTTALR PRSGVALQHR1020
 1021 PVVLLKELTD EEETAIHRPH HPWPVTLPPS LHLQVLSLPG WQYSRNHAQH LKNLQRGSLP1080
 1081 AAPSTSSPLT LSTGCREFRW FIQQMPLEGV GVLGSLVLSL LDSEDDGKGS RHDGGHPEKP1140
 1141 QVNLQRVLLR LHHLYEAGED PIALRGLGSV VAVEERSLTG TWDVQTLQRW HWRTKIGQLK1200
 1201 GHPGSNQHPK TQALTTVVPK NNCQVETSGF FGKLPFLGLG NSSEVIDLTG MCQVLASLHN1260
 1261 IRKKEEDEDE EEEEEEEEEE SRRKERAARL RGFSEAESWN SGGSFEDSAR ARSLSVVQTS1320
 1321 KAAEMRPLDA VELAEPEEVE VLEPEEDFEQ FLLPVIHEMR EDIASLTRER GRAPVRNRGK1380
 1381 LWEMDNMLIQ IKTQVEASEE SALNHLQGAG GAEPRGPRAE KADEKAQEMA KMAEMLVQLV1440
 1441 RRIEKSESS

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Created and Maintained by: Michael Riffle