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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086496
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRSRRGER ARAVIGSQDF RQEIWPERRL PLAQNAEPSL QCRVMSFQYH SKEQQCVIMA  60
   61 ENSKTSSIIR MRDVILFEKR VYLSECKTGI GKGYRGTMSK TKTGVTCQKW SDTSPHVPKY 120
  121 SPSTHPSEGL EENYCRNPDN DEQGPWCYTT DPDQRYEYCN IPECEEECMY CSGEKYEGKI 180
  181 SKTMSGLDCQ SWDSQSPHAH GYIPAKFPSK NLKMNYCRNP DGEPRPWCFT TDPNKRWEYC 240
  241 DIPRCTIVVV IIVIIVIIIF IFIIFIFIII IFIIMMPLPL KGSSLGRGEN YRGTVSVTAS 300
  301 GKTCQRWSEQ TPHRHNRTPE NFPCKNLEEN YCRNPDGETA PWCYTTDSQL RWEYCEIPSC 360
  361 GSSVSPDQSD SSVLPEQTPV VQECYQGNGK SYRGTSSTTN TGKKCQSWVS MTPHSHSKTP 420
  421 ANFPDAYQNL LIQHWRPSVY YMSLWETFLI HTHNQKYSVF QLKESSGLEM NYCRNPDNDQ 480
  481 RGPWCFTTDP SVRWEYCNLK RCSETGGGVA ESAIVPQVPS APGTSETDCM YGNGKEYRGK 540
  541 TAVTAAGTPC QEWAAQEPHS HRIFTPQTNP RAGLEKNYCR NPDGDVNGPW CYTMNPRKLY 600
  601 DYCNIPLCGP NGAFLNIPCI SVRGNYQRWD ADPALQYGDR LADVRECILE VNGEEAASLS 660
  661 SFECGKPQVE PKKCPGRVVG GCVANPHSWP WQISLRTRFS GQHFCGGTLI SPEWVLTAAH 720
  721 CLENPATITD NVIPACLPSP NYVVADRTLC YITGWGETK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle