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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33086486, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKTCADEFP LTVDSSEKQG VVCIFGTGDF GKSLGLKMLQ CGYSVVFGSR NPQVSSLLPR  60
   61 GAEVLCYSEA ASRSDVIVLA VHREHYDFLA ELADSLKGRV LIDVSNNQKM NQYPESNAEY 120
  121 LAQLVPGAHV VKAFNTISAW ALQSGTLDAS RQVFVCGNDS KAKDRVMDIA RTLGLTPLDQ 180
  181 GSLVAAKEIE NYPLQLFPMW RFPFYLSSGL CVFFFVYCAI REVIYPYVTG KTDSTYRLVV 240
  241 SIPNRVFPIT ALTLLALVYL PGILAAILQL YRGTKYRRFP NWLDHWMLCR KQLGLVALGF 300
  301 AFLHAIYTLV IPIRYYVRWR LRNATITQAL TNKDSPFSSS TAWLSDSYLA LGILGFFLFL 360
  361 LLGITSLPSV SNMVNWREFR FVQVRTVVSQ DICWISWRKH IPTTHFPTLK PSHKRTHNTI 420
  421 ISDPVAGPQE QAAADRTLSI WLRQGPAGSK LRSLNLLMLA PPSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle