YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44982489
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASLKIFKG LHILLIQSPQ FAESEITSVV EQLVGHGAAK TTVWGGTDDE KASTKEWIRD  60
   61 NFRANIHCII AADIDFPFYR SAAFDLMVPV VTPNWCSACV KNGRLMRTTG FSPDPEHFLK 120
  121 ECYIYISKHA LSTAEYELFS AMISFMGGCC MDFLSTKVTH IITTDPRDPA TLALERFGKL 180
  181 SVHSVTPTWI AECFACKQIV STTPYILDKA MEESSVRSCM VDNWFIDDKD WSWTSSIFLG 240
  241 HTFYLSMELP LKTSCYKFLI QLISAMGGQI ARYVDFEDIS PDRADSFIDL DLSKDCVYAR 300
  301 GKGLHCGNMA WLFYMLSMQQ FIAPTAKLVL SPRYPKLFTE KELVLAFTNY LGQQRYYIQR 360
  361 LVDLLGGSST TELSRKNTHL ISLFPHGKKH ETALKWNSCI VVNHLWLEQC YKLRKKLDPN 420
  421 APEFTRIPVP DELSNAIGQM ALETTARNMV SPRKAVSPDI VMHNSQTDVA LVVSTTDIDL 480
  481 KDNNESTNDT SVVHEPGKVM NSDDLTAVHS TKTRQEDANE MFSALDEAVS KGKKSCLPKK 540
  541 HIAASVAAST SNEISASAKS NKDSSDVQAT KQLPATPTSN PRQTKPKSTS GTQNDTASSQ 600
  601 KNTRRKNADD SPSSESSKTK KRKTTVVDAK QLVSPYLEEY SDTTGGRLPY DIKAVFTNCH 660
  661 ENITDLDKEI LRQLGIILQE EIEEDTNCII GPKKARTAKF LTSFSFHPLK YALLPKFITE 720
  721 ILSLVHSGRN EPISLPLEQY YIPDIDADVI AKTELPTKLF ERSGLQAVNL SEDIPGGVEV 780
  781 ISSILKAHGM VQINGLPKKF KAKDIAKNTV DNGSPDFVLV ATKASAAKKF SKLCEEVDRN 840
  841 AKVLIVEWNW CVKAIFSLEV DYNDPEFVIS KTGFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle