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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44982463, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPKERNDD GRLSPCASVE PSLMSTRTED HNDLYDHRQH PVAIARKQSV ADDSGPMGRN  60
   61 VLTNPRGSSE KQKSREENSQ ARLGRIRSGK LVDESQDEYP EHVRPIPRAT VSKSSAGWPA 120
  121 RAPHSASQQT LYGFPRERAD TEKDAGVSGT DGGLKSRRGS RTLSIVDTGL RRKMSRAQSE 180
  181 TSSQGGNLHF LSRTFSHKSQ DSGLVNVRRN RRMSADSDDS NASRESQETE EDVCFPMQQP 240
  241 EHTRINGIDF DELEEFAQES LRANLTMNIN VGVSKGDDVD MKCSGSPGSS TGTSTSISSA 300
  301 AMKYTPKGNF KQKDSSNETA PGISFGNNKV ETGEYLPMND LSSYANESAA YDTMDNGNIP 360
  361 ADNYKIPDRF SFFCSEAGET VHAPDIPSLV QDGETFRELF RDGAVTWWLD CSCPTDEEMR 420
  421 CIAKAFGIHP LTAEDIRMQE PREKVELFKS YYFVCFHTFE NDPESADFLE PINMYIVVFR 480
  481 NGVLTFHFSP VSHSANVRRR VRQLRDYVDV NSDWICYALI DDITDSFAPV IQTIEYEADV 540
  541 IEDCVFMTGD LDVSRMLQTI GEGRRKTMTL MRLLSGKADV IKMFAKRCQD EANGIGPALT 600
  601 SEINIANLQA SGHDPLSARL GSNIQHHHVQ RTQPRADIAL YLGDIQDHVL TMFQNLLSYE 660
  661 KIFSRSHGNY LAQLQVESFR CNNRVTEMLG KVTMIGTMLV PLNLVTGLFG MNVTVPGEAT 720
  721 GELHWFFGIL AILVGSAVGL WFLSSWWISK ANSPRSLNDT VMSGTRSILN FARRNRNDQC 780
  781 RPEGNKSVIS CPSKYARYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle