YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44982431, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGAIQQIRD LSYTPGIAWL NSAMLLATPV LSPAQPAAAA TVPQAGGWLA RAARPKHIGP  60
   61 TAKTSLLFSA AQALGGWIIH DGDLESGSGF LAAWSALYLV VGGRGSVRAL RYGRLWPLVL 120
  121 AASSGLGGLA YGERFLSGRF LA

Type	Start	End	Confidence
Cytoplasmic	1	16	0.58
Transmembrane Helix	17	39	0.66
Non-Cytoplasmic	40	86	0.44
Transmembrane Helix	87	107	0.84
Cytoplasmic	108	114	0.75
Transmembrane Helix	115	132	0.92
Non-Cytoplasmic	133	142	0.79