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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45187512, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSHWMIAV SAALAAGATA SSAAEQWNVA DLKEYLKDSG QEVAHDSLDA LRDAASKEWE  60
   61 KHTDGRKSML DLLWRPKQTP HDWFGSDYTN PVSEWLFNTW PVEELQKLLK HSRVKTDPTW 120
  121 SRDKLVAVSK RNFKKISETL GVSGYYPSES YFKLWDSSEL KEWLEDYGIP YSKAATARDQ 180
  181 LLKVVRENIR RASDFYHDER YEVLTSVGFL NDEFSRTGTV DHVDFSSWPL DSLRSWLEVH 240
  241 KLKFDRNMAE DKQYLVALAE KNKKLLMDDV EWLGSIAQKE LAEIFKQKDA AMKLSKEAAG 300
  301 KSKNAIKKSG QNAVQYGKDA GNAAMGYGKN VGKDAVNAGR DVANAGKHAG KDAVNAGKDA 360
  361 VNTGKHAGKD AVNAGKKAGK DAVAAGKHAG KDVVDAGRDA IHAGKEAGMD AVEVGREAGD 420
  421 SFVHHGKDLF HAGQESAESL WDSIKGYFNK ADDVINDTFL LDVENWPKRR LKHFLEARGV 480
  481 KYSLLSTRKD LLKSVIKYRN KPVHDLKETK NKWFPSWTLE NLQHWSSEKT EQGKEKYNSA 540
  541 KDHLKAGSNK VQDQSKEANE AIKQKIDDWV ETFNSWTTDD LQTYLRSFGI QPPKSYKKDQ 600
  601 LVDLALKHSK AFFGSSSDSS ESGYFRFVPR IARKWFNYGY SLLVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle