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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44981766, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVNTAMHDR DEMSTTGYQR HEAGPANKRG KASAEDGAGV QEEDVSKLRE VQQERNPLYK  60
   61 LEAFVMPVLF TLLALYTRMH KIGANNRVVW DEAHFGKFGS YYLRHEFYHD VHPPLGKMLV 120
  121 GLSGYIAGYN GSWDFPSGEE YPEYIDYVKM RMFNAVFSAM CAPVAYFTGK AIGFSLPTVW 180
  181 LFSILVVFEN SYATLGRFIL LDSMLLFFTV CSFYTFVLFH NERHRPFGRK WWKWLFFLGV 240
  241 SLGCTISVKM VGLFIISVVG IYTVVDLWNK LSEPNMSVSR FAGHFSARAL CLIVVPFMVF 300
  301 LFCFKLHFEF LSVSGTGDAM MPSLFQAGLS GSSVGIGPRD IAVGSSLVSI KNQALGGTLL 360
  361 HSHVQTYPSG SSQQQVTTYG HNDSNNNWVF DRIRGLPAWS INETEHEFVQ DGRPYRLVHA 420
  421 NTGRNLHTHP IPAPVSKTHW EVSGYGDAQV GDPKDNWIIE FVSQPSDEDK SVLHTISTSF 480
  481 RIKNVEMGCY LAQTGPSLPE WGFRQGEVAC ISNPFKRDKR TWWNIETNVN ERLPPMPEDF 540
  541 KYPKTSFFKD FVHLNLAMMA TNNALVPDPD KLDQLASSAW QWPTLNVGIR LCSWADDVRK 600
  601 YFLIGSPAST WPSTAAVGVF CLITVYYLLK WQRQLVLFQA SDDANIFLMG GIYPLLGWGL 660
  661 HYLPFAVMGR VTYVHHYLPA LYFALLILAY VFEASLRAAR QSQKSYWKIL VYVVYAVYYC 720
  721 TIICGFYYFY PITVGMEGPS SNYKHLNWLK TWSIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle