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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44981696
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRRDDNLTS GLRELKIGSG SHIVKGAAGS ALPSAERRGG EHMRSTKDVA DQGIDVPSMV  60
   61 KRALSDSRRR SKLRAANSGD ASACSASPQE QESPRSSVAP VTPATSTLET VYQEAESSDE 120
  121 DWQPMPAIAS YDVYDERGEL AVTRLSDSPV DISGMDSAAS LDSSVRGKDC GAFGYTKAAG 180
  181 EEQAQRAYAT NKKTDFLFRK TAAGSSMGSA VAEDITIYDD RDSTPVGIRS AGEQLVLTKT 240
  241 LLNDRAKFAY LGAVTVLANQ TCTNLAELCL CSKNVTSSKK LAHRLHILQK NMGVWQSTIC 300
  301 QRLYAHLGVS AEEIEMIQKL PMHGIRLQDL CKCLKTTQVI ENPWMKSGDD IMMPDEVKKN 360
  361 QTLEIDVSWT IICDLFLLLV HDSVYDSRSR TLLMRFAEVL DISRGDICEF EKRVIDTLDL 420
  421 EQSTDEQVWI EKNHMHERRK ENRKKKLAYV GLVTIGGSLV LGLSGGLLAP VIGASLAAGL 480
  481 STIGVTGAAG FLTGAGGTAI VAVSSTAIGG NIGRKAMNKR MGSVKTFEFR PLHNNRRLSL 540
  541 IVSVSGWMIG KEDDVRLPFS PVDPIEGDLY SLHWEPDMLK STGQTINILA SEIVTQTIQQ 600
  601 ILGATVLTAL MAAIQVPNLL SKLGYIIDNP WNVSLDRAWA AGLILADTLM AQNLGARPIS 660
  661 LVGFSLGSRV IYSCLLELSK QGAIGLVEDV YLFGSPLVYN RDEMVMARAV VSGRFVNGYS 720
  721 DKDWILGYLF RVTAGGLKTV AGISPIEGIE GIENMNCTEL VEGHMAYRKN IPSLLKRLGV 780
  781 AVLSEEFTEI DDSPDPEQVK RERKLIHDLQ DVQDKLANKK DKKQKGTWVS KWFKPKREQW 840
  841 QEMYEDSLRN NAAAATTTNG AVAPTVQSEQ SCQTLEDASP IIDTDALVEE LQYLKEVVDK 900
  901 EMTNYKDVND LMKDVAEHAQ RGLRRTDIAL SDDEFGNEEN VTYAFADDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle