YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44981651, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHRQKVLS IVAAAAIVGL WYMFFGQQLS NRETYDPDVV PQQEGRTPAA VRAAADKNQA  60
   61 PMIKGSIMPG MPDPTAKQEL GRATWKLFHT MLARFPDEPS EQEREKLHTF LHLLAELYPC 120
  121 GECSVHFVSW LKKLPPQTSS RSAAATWGCS IHNKVNLYLG KPAYDCSKIL EDYDCGCGDD 180
  181 AAAGSLKVSV HTERPQGG

Type	Start	End	Confidence
Cytoplasmic	1	7	0.72
Transmembrane Helix	8	25	0.76
Non-Cytoplasmic	26	198	0.99