YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44981551, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKEPLIPQQ SRRRRRFIVV RFSDPTLQDL TLEVSSIPYA DVTTRWLRAM VRQIRPAKTV  60
   61 RHRLKFIRNG QPLNAMSNLR LEQFFESAEE NDKYYIHCIV GPELTTEQLQ DEDALDNVGQ 120
  121 QVDGTTPEVI GFDRLRSVGF SDEEIELLRQ QFRATYGDLD TSQQPDGERA DLRQLEEQWI 180
  181 ETGATEQGAQ LSSIPTANYR YNMDLLIGLM VGCLFGVFSI LLLKQGELFT KRQKMAVFAG 240
  241 IVANVIFGMT HW

Type	Start	End	Confidence
Non-Cytoplasmic	1	200	0.81
Transmembrane Helix	201	223	0.90
Cytoplasmic	224	233	0.70
Transmembrane Helix	234	251	0.80
Non-Cytoplasmic	252	252	0.79