YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44981432, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRRAKSLP SLKNIAEVAK PITKAPPLPL LAFEGPGLST CRWYPTTVRT VHNTPSKAQT  60
   61 TLLSTAKKES AFSAMNLKAL RNECRSRGLQ VSGRKSDLIE RIVDFELKGP LGRRGTRRAF 120
  121 HSPGTSSASV CRPVDKVTMP DIALTERAVQ QPEKNYILRI PSLSREAASH PVTKSEKDLA 180
  181 QGADEDADPT SEEGRVLTPD SDLHIESPVV INKIEIINED DYLQDDSRQS SDSQGGSQQD 240
  241 SDGTGQQNFS PRDRRFFAGL TAAVGLWWYF GNKSAKRRMR K

Type	Start	End	Confidence
Non-Cytoplasmic	1	255	0.97
Transmembrane Helix	256	271	0.96
Cytoplasmic	272	281	0.89