YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44981136
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAIIPFIT IGWLRCTRKS RDTMSSSPEP QAPMHVTQRQ ISVFSDEFRQ RRRQQMLRFF  60
   61 GATAFTLLSA RLAFFGTINR KYVPNMFQLN HRVPLASSQG EALHAFAYGS GLATGGFAML 120
  121 ILGTCWLADV STVPEFSLRI KALLGESDTQ SGRLESAHQD KETRELAAML DSLLQEKKD

Type	Start	End	Confidence
Cytoplasmic	1	56	0.99
Transmembrane Helix	57	78	0.91
Non-Cytoplasmic	79	104	0.96
Transmembrane Helix	105	128	0.86
Cytoplasmic	129	179	0.96