YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44981131
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGINLPFIL SVTMASLATG YYLGQIYGGA THACLSELNA QAVLKQVKDR AESASRDAEE  60
   61 LDSTYEDDSD EEVVEVSSLP LNDIPGEVRM ALVIRQDLGM TKGKIAAQCC HAALACYRLM 120
  121 AEDVTRVSYN RDMVMRWLQR GQAKITLKCP DKETMDELFA KAMALGVNCH VVHDAGRTQI 180
  181 AAGSATVLGL GPAPKAVLDE ITGELKLY

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	208	0.97