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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|44980995
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLWSFVISY LLGGLTFFPL CALAAFYIAS KPKGSGGRRT TEPAVLAACD PDFKVGELEE  60
   61 QKGVDAFKKG WVYVTNKYYY HTSELQRVPS PERDALPTRD KMKRKKKFYA VLKHGNLFLY 120
  121 KSDAPNTDVF QVIVLKNSFV TLWPRDSSAE LSDASLFTNR TCISICKNGK AYLDEDGKLQ 180
  181 FETGGDIGPA DQYFVYVDNN VDKEDWYFAL INASKISSSG TLLDPARSAK TAHLKTKDSL 240
  241 YLIQTVNSTE GQFATKWLNT LISRLFLSLQ QTEMLNDWLL EKVHKKLTKI NKPGFLDDFK 300
  301 IEHIDVGNAA PMITNPKLLE FAPEGQTKIR FNLVYRGNLS LIISTKVNIN LGCRFKSKEG 360
  361 AIELAITRRE LGGPMILLVN LLPSNRMWYA FESEPLLNLD IEPVVSTRQL SSNMIINVLK 420
  421 SKFKKALRES IVLPYMDDMV FYPTQNEIYR GGIWMHERQE PSEAPQQLSS SGESSDNVPT 480
  481 NIPSGKLDAS APSASISEKL HSPSLSPDQK SSFSSKPSDD ELNSSSLRKA AEAHHSSDSD 540
  541 SASERESLGD GSLKTKTMHR VGNLKNMIKA RTTADASIRS VESTSSLDST TSKKYFQTGM 600
  601 KKIGRWYKDQ VNNARDAVTD AQLDILQKAE HGPFVPEPPK PVGPEMISNR RSHPRLKSQS 660
  661 DIRDDFMKSS AESSADMFVN RARATSFDAP KSPNLNATYP FGSQSPMTPV SPTSAMSRRL 720
  721 SANSQQEQAH SSDSIPVDSP PTTIKETISE VPEFKEFTKE NKGEPPAVPD MATAAAATVF 780
  781 STTPSSILVN GQNVSPKAFA RLRPLPVVPN EEIVSQLEDC EPAKDPAPFI PPDLPPRSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle