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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHA_SOLTU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLPGHERR WTSDTVSSGK DLSGESSPGT DSGNISGFAS EEFVEVILDL QDDDTIILRS  60
   61 VEPATVINID ASDPATGVGI GGVSIETPAS LTSTSGTRSP TMRRSTSNKL RQFSQELKAE 120
  121 AVAKAKHFSQ ELKAELRRFS WSHGHASRTF SPASFFQNAV VGTGNGVDSA LAARALRRQR 180
  181 AQLDRTRSSA HKALRGLKFI SNNKTNGWNE VENNFAKLAK DGYLYRSDFA QCIGMKDSKE 240
  241 FALELFDALS RRRRLKVDKI SKEELYEYWS QITDQSFDSR LQIFFDMVDK NEDGRIGEEE 300
  301 VKEIIMLSAS ANKLSRLKEQ AEEYAALIME ELDPERLGYI ELWQLETLLL QKDTYLNYSQ 360
  361 ALSYTSQALS QNLQGLRKRS PIRRMSTKLV YSLQENWKRI WVLVLWILIM IGLFLWKFYL 420
  421 YKQKSAFQVM GYCLLTAKGA AETLKFNMAL ILLPVCRNTI TFLRSTKLSC FVPFDDNINF 480
  481 HKTVAAAIVT GIILHAGNHL VCDFPKLIHA NNTNYQKYLV NDFGPSQPQY IDLVKGVEGV 540
  541 TGIIMVILMA IAFTLATRWF RRSLIKFPKP FDRLTGFNAF WYSHHLLIIV YIVLIIHGTF 600
  601 LYLVHNWYSK TTWMYLAVPV LLYAGERTLR FFRSGLYTVR LLKVAIYPGN VLTLQMSKPP 660
  661 QFRYKSGQYM FVQCPAVSPF EWHPFSITSA PGDDYLSIHI RQLGDWTQEL KRVFSEACEQ 720
  721 PEAGKSGLLR ADENTKTSLP KLLIDGPYGA PAQDYRKYDV LLLVGLGIGA TPFISILKDL 780
  781 LKNIVTMEEQ ADLVSDFSGN SDMSAATSEQ PALNKISPKK RKSTLKTTNA YFYWVTREQG 840
  841 SFDWFKGVMN EVAELDQRGV IEMHNYLTSV YEEGDARSAL ITMVQALNHA KNGVDIVSGT 900
  901 SVRTHFARPN WRKVFSKTLT KHANARIGVF YCGAPILAKE LSKLCKEFNQ KGTTKFEFHK 960
  961 EHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle