YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17384016
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLPGHERR WTSDTVSSDK DFSGELSPGA DSGYNSGFAS EEFVEVTLDL QDDDTIILRS  60
   61 VEPATVINID APDLPAGVGI SGVSIETPTS ASVSESRSPT IRRSSSSKLR QFSQELKAEA 120
  121 VAKARQFSQE LKAELRRFSW SHGHASRAFS PSSFFQNAVV GTGNGVDSAL AARALRRQRA 180
  181 QLDRTRSSAH RALRRLKFIS NNKTNGWNEV ENNFSKLAKD GYLYRSDFAQ CIGMKDSKEF 240
  241 ALELFDALSR RRRLKVDKIS KEELYEYWSQ ITDQSFDSRL QISFDMVDKN EDGRIAEEEV 300
  301 KEIIMLSASA NKLSRLKEQA EEYAALIMEE LDPERLGYIE LWQLETLLLQ KDTYLNYSQA 360
  361 LSYTSQALSQ NLHGLRKKSP IKRMSTKLVY SLQENWKRIW VLTLWILIMI GLFLWKFYQY 420
  421 KNKSAFRVMG YCLVTAKGAA ETLKFNMALI LLPVCRNTIT WLRSTKLSHF VPFDDNINFH 480
  481 KTVAAAIVTG IILHAGNHLV CDFPRLIHAD DQDYQSFLSN DFGQSKPGYI DLVKGVEGVT 540
  541 GIIMVILMAI AFTLATRWFR RSLIKLPKPF DRLTGFNAFW YSHHLLVIVY ILLIIHGTFL 600
  601 FLVHKWYSKT TWMYLAVPVL LYAGERTLRF FRSGLYTVRL LKVAIYPGNV LTLQMSKPPQ 660
  661 FRYKSGQYMF VQCPAVSPFE WHPFSITSAP GDDYLSIHIR QLGDWTQELK RVFSEACERP 720
  721 EAGKSGLLRA DENTKKSLPK LLIDGPYGAP AQDYRKYDVL LLVGLGIGAT PFISILKDLL 780
  781 VNIVKMEEQA DLASDFSGNS DMSVATSEQP ALNKISLKRR KSTLRTTNAY FYWVTREQGS 840
  841 FDWFKGVMNE VAELDQRGVI EMHNYLTSVY EEGDARSALI TMVQALNHAK NGVDIVSGTR 900
  901 VRTHFARPNW KKVFSKTLTK HANARIGVFY CGAPVLAKEL SKLCKEYNQK GATKFEFHKE 960
  961 HF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle