YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45185093, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFTYKDAC TVGSALIVSA TTFIMGVFFA NQAYDYHLLF NANMTQEHYD NALRHYQTLY  60
   61 FTAQPVLYIF GAIAIFGLLG SLIRIYKPNP ELQLFEYGSL AMYVLGVCVF LTNIKTGINS 120
  121 AHYGNWGEVT QNQGLAVIAS SNIILLVVFV GVLVLQGGLW YSEWEYEQRL ETFMAEQEAE 180
  181 NSAAPKEPAK GGKKSAKSKK E

Type	Start	End	Confidence
Cytoplasmic	1	9	0.93
Transmembrane Helix	10	30	0.95
Non-Cytoplasmic	31	64	0.91
Transmembrane Helix	65	86	0.90
Cytoplasmic	87	93	0.94
Transmembrane Helix	94	117	0.84
Non-Cytoplasmic	118	134	0.91
Transmembrane Helix	135	160	0.86
Cytoplasmic	161	201	0.98