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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BRE4_ASHGO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLKGSYKQ KSFQSLKDLG QQGSSAAPGV RPTKSLQTSP IGSWTSLSHL RLEKLAEGSG  60
   61 WEELQDYGLE ELRDGFFDAS YSRPQRVAAT EPPVSTSPKA QSPLAVRCKA FRDRLRVHWK 120
  121 AVVKFTVAYL AAMFLCLVRP ASDWIGDVYS CFLPVAVLIH HPVRTVGVQL EITVQSIVGL 180
  181 ALGQGWSALW WYVCSVARVG RHESALLFLS LVLSGLWSSW LAAAYGRLVY MSVSFGITAT 240
  241 FFATSMPPSE GSLPIWPQFW DQGMSYLFGL LLSLLVCIFL FPRFGHATIG RGFSSAANDL 300
  301 KHLLDYLVDA RYCNDIPMLV EAQENAVSAI DVRLSEGYRE FANQFSITRF DGKLLEQLRN 360
  361 SLTIAASPLR SLPLGHGLLT NVELERFHQA RPQSAPENTI CVRDADDHYE DQAIKTEESA 420
  421 NLGLACGSTD LCSAIIRDKF SETIFDLIME LIHALNSLQV GLNNISESNV SASERADIKA 480
  481 NILACLSNLH DRIRRLDIKY KEFGRAGLFT SELLLNPKSS DALVFLRYIR QCAKHMTKVL 540
  541 EVFLQLNASV HWRVIPPKYQ WHRAIHRLSH QCALDQGASF LWNYFQTKRD VDDAFEMIYN 600
  601 SYTSKHHEVS DLFSRQGMRP RIRAFDHKDF AVHSTSNPIR YKLWQLNNSL LGPESRWARK 660
  661 FTVVLVALCL PGWLPGSKVW YREYHCLWAP IIYVILSNRR NSSNWRALYK RLAGCVLGVF 720
  721 WAWCANQAKH YSNPFIIATF SVLLCIPLAF NYFAYNRRKS TLAALICFTV PALVTFFLEE 780
  781 HTTASLWKQA WTTGVALLIG TFCSIPINWF IWTFTARSEL SLAVSGLLMH LSQSYQIVAG 840
  841 RYLYRDTDDH PNDLTRSLAS IREVRLSQSL LATRALVRSA VSEPNIVSEF RAYLFDELLD 900
  901 HFSVLLERLI EARRLGQHFQ VWDRDPNTET TRALLSLRRD NVASVIFIFY MLSNCFSSGS 960
  961 KVPKYLPNPI FVRKKLFDTF MKLAEDASAR GTSAHSSTPA APNNTDPSSP SSAGQDHWDE1020
 1021 VYAICFSRAF TDISVELQRI IDLAKEILGQ EGD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle