YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|44980622
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNKIDESI DKARSGAKNL IDKASDGSKK LAKDAKKGLE KGESELQRAA ERVGEWLSGA  60
   61 AAGTWDVAAK TAGAARDVAS KVFVELQNPV VAVNAVLGGG ALMAWLHGYA EHQSRYLQGK 120
  121 TDRAILATVG GVAALVAADG LLSYKYYRQF DRK

Type	Start	End	Confidence
Cytoplasmic	1	89	0.89
Transmembrane Helix	90	109	0.88
Non-Cytoplasmic	110	123	0.86
Transmembrane Helix	124	144	0.91
Cytoplasmic	145	153	0.76