YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRE2_ASHGO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHSRTALVL IHPATTTRPE LLTAAKQHSS LSGANIEQHL VNKLNDGSLQ LQDNSYDVIF  60
   61 YVTPEAADEI LFPRRLIGVL AAALRAGGSL HGLYDKYQVD ALLSGFDIVR EPTYHWQKRA 120
  121 VTASAPVKLA PRQPVSAAGL PRFKRASAPS PAAVTPTLDE VPPAAVDPVK AALLDSAAGD 180
  181 APIAENDLVV GHDSTPITLL TCGRTQTRRR KACKDCTCGL REENEKEISD THARQEKLLL 240
  241 GDAVKFSEPE LAEIDFTIEG KKVGGCGSCS LGDAFRCSGC PYLGLPAFKP GQPINLSAIS 300
  301 DDL

Type	Start	End	Confidence
Signal Peptide	1	19	0.69
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	303	0.99