YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMM1_ASHGO
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVENTLSQ SESVNRGYNG WMGMESETSA RATHSSEQMI SLEEYVREML PMHLQKLLME  60
   61 RIIEAEQTGA AHTSVFAAPT GVAAQYPAMG PPMLPGQTFS SRSFAEGLVV GQLSVIVVLI 120
  121 FFIKFFIFSD GPAKTGGGGG SSAESRSSGF TGSPLTSTTS RLLSTLIKRG GKEGTEFAED 180
  181 SENERTRQIN AILEKTYYDV ETHSPESLDW FNVLIAQTIQ KFREEALQKD NIVHSLNDFI 240
  241 SRKSSQLPNY LDAVKITELD IGDDFPIFSN CRIKYSPPLN KKRLEAKIDI DLSDRLTLGI 300
  301 ETRLLMNYPK YLTASLPVKL TVSMLRFQAC LTVSLTTAEE FVPTMAATTD TDAGDSEGHY 360
  361 LVFSFSPDYR MEFDIKSLIG ARSKLENIPK ISSLVEYQIK KWFMDRCVEP RFQFVKLPSM 420
  421 WPRSKNTREE KSDMQEEDPS RAPE

Type	Start	End	Confidence
Cytoplasmic	1	68	0.86
Transmembrane Helix	69	88	0.63
Non-Cytoplasmic	89	107	0.67
Transmembrane Helix	108	128	0.86
Cytoplasmic	129	444	0.68