YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33150702
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKDQQKDA EAEGLSGTTL LPKLIPSGAG REWLERRRGP IRPWSTFVDQ QRFSRPRNLG  60
   61 ELCQRLVRNV EYYQSNYVFV FLGLILYCVV TSPMLLVALA VFFGACYILY LRTLESKLVL 120
  121 FGREVSPAHQ YALAGGISFP FFWLAGAGSA VFWVLGATLV VIGSHAAFHQ IEAVDGEELQ 180
  181 MEPV

Type	Start	End	Confidence
Cytoplasmic	1	77	0.81
Transmembrane Helix	78	111	0.80
Non-Cytoplasmic	112	138	0.68
Transmembrane Helix	139	163	0.83
Cytoplasmic	164	184	0.70