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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15603857, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLIASLL FGSTTAFAAP FVVKDIRVDG VQAGTEGSVL ATLPVRVGQR ATDNDIANVV  60
   61 RKLFLSGQYD DVKASREGNT LVVTVMPKPV ISNVVIDGNK SIPDEAIKQN LDANGFKVGD 120
  121 VLNRAKLEEF RKGIVEHYNS VGRYNAKVEA IVNTLPNNSA EIKIQINEDD VALFKEIIFE 180
  181 GNQAFSSSKL EDQMELQTDA WWKLFGNKFD QTQFNKDLET LRSYYLDRGY AQFQILDTDI 240
  241 KLSDDKKEAR VIIKVKEGDL YTVKSARILG DVGGMSAELA PILDAIQLNG LFRRANVLEV 300
  301 EQRIKSKLGE RGYATAQVNV HPTFDEQDKT ISLDFIVEAG KSYTVRQIRF EGNTSSADST 360
  361 LRQEMRQQEG AWLSSELVEL GKLRLDRTGF FESVETKTEA IPGSDQVDVI YKVKERNTGS 420
  421 INFGIGYGTE SGLSYQASIK QDNFLGMGSS ISLGGTRNDY GTTINLGYNE PYFTKDGVSL 480
  481 GGNVFFEEYD SSKSNTSAAY GRTSYGGNLT LGFPVNENNS YYLGVGYTYN KLKNIAPEYN 540
  541 RDLYRQSMKY NDSWTFKSHD FDLSFGWNYN SLNRGYFPTK GVRANIGGRV TIPGSDNKYY 600
  601 KLNAEAQGFY PLDREHGWVL SSRISASFAD GFGGKRLPFY QYYSAGGIGS LRGFAYGAIG 660
  661 PNAIYRTRQC PDSYCLVSSD VIGGNAMVTA STELIVPTPF VADKNQNSVR TSLFVDAASV 720
  721 WNTRWKAEDK AKFAKLNVPD YSDPSRVRAS AGVALQWQSP IGPLVFSYAK PLKKYQGDEI 780
  781 EQFQFSIGGT F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle