YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15602567, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDYIIIAII AFSIIISLLR GFIREVMSVA SWVVAFFVAN HFYPYLANYL TQIESLYLRN  60
   61 GTAIAILFVA TLIVGGIVNH ILGELVDKTG LTGTDRVLGA CFGLIRGVLI VAALLFFMDT 120
  121 FTNFSQTVWW KESKLIPHFG FIVEWFFQQL QATSSFINST LNK

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.60
Transmembrane Helix	5	23	0.77
Cytoplasmic	24	28	0.60
Transmembrane Helix	29	47	0.84
Non-Cytoplasmic	48	60	0.77
Transmembrane Helix	61	83	0.90
Cytoplasmic	84	96	0.83
Transmembrane Helix	97	118	0.89
Non-Cytoplasmic	119	163	0.68