YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15602559, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLEQALTQ MLAMLPTPDC AQAEQLPLQH AVNRICAEDI ISPLNVPSFD NSAMDGYAVR  60
   61 LADLAQNLTL TVAGKSFAGA PFDGEWQTQS TVRIMTGAML PVGADAVVMQ EDVIVNEDGT 120
  121 VTFPEKIKAG QNIRYIGEDV KQGEVVLNKG SLLNAVSLPL LASLGIDNVK VFPRLKVAVL 180
  181 STGDELVPVG QPLKEGQIYD TNRFTIQLLL EKLNCEILDF GLLPDNEQEF EKAFIEAQQQ 240
  241 ADLVITSGGV SVGEADFTKK VLEKVGQVNF WKIAMKPGKP FAFGRLKNAW FCGLPGNPVS 300
  301 ALATFYQLVQ PVIAKLSGYS QWKAPQRLTA IAATKMKKAP GRLDFQRGFY QVNAQGQIEV 360
  361 QPVGFQGSHL FSSFVKSNCF IVLERERGNV EAGETVTIEP FNHLMS

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	406	0.99