YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15602438, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAMKHSQLL ILGSGPAGYT AAIYAARANL KPVLVTGLQQ GGQLTTTTEI ENWPGDFGET  60
   61 TGPELMQRML QHAEKFDTEI IFDHINKVDL SSRPFKLYGD VHTFSCDALI IATGASARYL 120
  121 GLPSEEAYKG RGVSACATCD GFFYRNKPVA VIGGGNTAVE EALYLANIAS EVHLVHRRDS 180
  181 FRSEKILIDR LMKKVEEGKI ILHTNRTLDE VLGDNMGVTG VRLKDTQSEA TEELSLDGVF 240
  241 IAIGHAPNTD IFAEQLELNN GYIVVKSGLE GNATATSVDG VFAAGDVMDH NYRQAITSAG 300
  301 TGCMAALDAE RYLDAQK

Type	Start	End	Confidence
Signal Peptide	1	25	0.83
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	317	0.99