YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15602225, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKKSVNIAV MLTALFSLLC SLAYASPQEW QKIKRPIPGS PEPIGSYSNG CIIGAQALPY  60
   61 KGDGYQVIRK NRNRYYGHPD MIDYLQRLGK KVKAAGLPTM LIGDIAMPGG GRFLTGHASH 120
  121 QMGLDADIWL RMGTMSDQDA LNSDGKGLLV VDRKAQRVDE RVWNNNHALL IKLAAEDPKV 180
  181 TRIFVNPAIK LKLCQSAGNQ RAWLHKVRPW FGHDSHFHVR LTCPKGASYC ENQAPVPAGD 240
  241 GCGSELYSWF EPPKPTKTPS EPKAVPQAPP LCQQILNAPN RSEWLE

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	286	0.99