YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12720534, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTTTIKFSA ITLALLSYCG AILADSHQEA TELDTITVSS QQDEMNIKEK KVGETVKTAS  60
   61 QLKRQQVQDS RDLVRYETGV TVVEAGRFGS SGYAIRGVDE NRVAITVDGL HQAETLSSQG 120
  121 FKELFEGYGN FNNTRNSVEI ETLKVAKIAK GADSVKVGSG SLGGAVLFET KDARDFLTEK 180
  181 DWHIGYKAGY STADNQGLNA VTLAGRYQMF DALIMHSKRH GHELENYDYK NGRDIQGKER 240
  241 EKADPYTITK ESTLVKFSFS PTENHRFTVA SDTYIQRSRG HDRSYSLQPQ SNYFTYDEKE 300
  301 SRHANDLTKR KNVSFTYENY SITPFWDTLK LSYSQQKIRT RARTEDYCDG NEKCDSYKNP 360
  361 LGLQLKDGKI VDPAGNQITL KGTGFNTEIV DKDGKPFPTT SGTNNAAFSN NLQLSPTGFW 420
  421 LDCTIFDCTK PFTVYNYKQN KYEPREVMLS EEITIDGKLY KTAKEESGVR NYLILPNSKG 480
  481 YLPYDYKERD LDSNTKQINL DLTKTFSTFN IENELLYGAI YSRTEKKMVN KAGYDGRNPT 540
  541 WWADRILGKS TNCNYNGLKC PRHEPLTSFL IPVEATTKSL YFSDNIKLHN MLSVDLGYRY 600
  601 DDIKYQPEYI PGVTPKIADD MVKGIFIPLP KGEKIKIGNY ETTKPLTPEQ IRKNAEENIA 660
  661 YIAQEKRFKK HSYSLGATFD PLNFLRVQVK YSKGFRAPTS DELYFTFKHP DFTILPNPVL 720
  721 KPEEAKNQEI ALTVHDNWGF VSTSVFQTKY RHFIDLAYLG SRNLSNSVGG KAQARDFQVY 780
  781 QNVNVDNAKV KGVEINARLN LGYFWHVLDG FNTSYKFTYQ RGRLDGDRPM NAIQPKASVF 840
  841 GLGYDHKENK FGADLYITRV SEKKAKDTYN MFYKEQGYKD SAIRWRSDDY TLIDAVGYIK 900
  901 PIKNLTLQFG VYNLTDRKYL TWESARSIKP FGTSNLINQK TGAGINRFYS PGRNFKLSAE 960
  961 ITF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle