YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12720256, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTALLTV NTHLRNVIMK KISTLALALS AVISTSAMAA NEVNVYSYRQ PYLIEPMLKD  60
   61 FEKDTGVKVN VIFADKGLVD RVKREGELSP ADVLLTVDIS RVMEIVKEGL AQPIHSETLE 120
  121 KNIPAQFRDS KDEWFALTTR ARAIYTAKDR VGKLPADFTY YDLAKPEYKG KVCVRSGKNA 180
  181 YNVSLVASMI AHDGEAKAKA FLEGLKANLA QKPQGGDRDQ VKAIKEGICD YALGNSYYFG 240
  241 KMLDDEKQRS WAEAVYINFP NQKAQGTHVN ISGVAIAKHA PNKANAVKLV EYLSGDKAQH 300
  301 LYAELNHEYP VKPGVERSKL VASWGEFKAD DIALEKIAEN YDKALKLIDE VKFDL

Type	Start	End	Confidence
Signal Peptide	1	39	0.99
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	355	0.99