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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31540577
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNKGRKCLY SLKRISCLLI ILCIIISTAS ISFVQAAEQL QVDIGKVSGE PGSIVSVPVT  60
   61 FSNVPATGIY ALSFSVNFDK SMLSVVSVEP GSLIEDPSDF NHYYNNVNGL ASMSFEAPVD 120
  121 GSRMIDNNGV FASIKFKISE TAPVGESYDI TTNYSRTSFY STGTEEIVNI LCNNGAINVG 180
  181 ADLKAEIGSV SGKPGSVVSV PITFSNVPKS GIYALSFRIG YDNTKIRVVG VESGSLVEKA 240
  241 EDFNMFINNT YNFTSMTFEA PIDGSRMIKS DGVFAQVKFQ ISDTALQGET YKISQISSNT 300
  301 SFYSTAVTEI TDVIYADGAI KVGSDLQVDI GSTSGKAGSV VSVPITFTNV PKSGIYALSF 360
  361 RTNFDPQKVT VASIDAGSLI ENASDFTTYY NNENGFASMT FEAPVDRARI IDSDGVFATI 420
  421 NFKVSDSAKV GELYNITTNS AYTSFYYSGT DEIKNVVYND GKIEVIASPT PTQSATPTVT 480
  481 PSATATPTQS ATPTVTPSAT ATTTPTQSAK PTVTPSATAT PTPTQSAKPT VTPSATATPT 540
  541 PTQSAKPTVT PSATATPTPT QSAMPTVTPS ATATPTPTQS AMPTETPSAT ATPTPTQSAM 600
  601 PTVTPSATAT PTPTQSAIPT VTPSATATPT PTQSAMPTVT PSATATPTPT QSAKPTVTPS 660
  661 ATATPTPTQS AMPTVTPSAT ATPTPTQSAM PTVTPSATAT PTPTQSAMPT VTPSTTATPT 720
  721 PTQSAMPTVT PSATATPTPT QSAMPTVTPS ATATPTPTQS AKPTVTPSAT ATPTPTQSAM 780
  781 PTVTPSATAT PTPTQSAMPT VTPSATATPT PTQSAKPTVT PSATVTPTPT QSAMPTVTPS 840
  841 ATATPTPTQS AKPTVTPSAT ATPTPTQSAM PTVTPSATAT PTPTQSAKPT ETPSATATPT 900
  901 PTQSAMPTET PSATATPTPT QSEMPTETPS ATATPTPTQS AIPTVTPEVT TSATPTPTPT 960
  961 GSVTPGVTTS TTPTPTQTVK PTATTVNEGP GVIPGGNPDV NPSPITTPTP KPTATPTSGA1020
 1021 VVEPTSEVPG PDGLPLSHTA YLKGYPNGLF LPDNNITRAE AATILAKLSG ADVTYVSDKV1080
 1081 SFPDVKDTHW ALWAIKYTTD KGYFKGYTDG TFKPDQKITR AEFATIVYHF LGIEDTNITK1140
 1141 YKFEDVKGHW AQVYIEKLTE LKYISGYPNG NFEPQASIKR CESVALLNRA LKRGPLYGTT1200
 1201 QKFPDVPTTH WAFKDIAEGA LDHQYIIEGT LEKLYVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle