YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28199569, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARINLLPWR VERRKQRERE FYVMLGFSTL VGILVSALVW FYYDAQVSGQ NDRNAFLVSE  60
   61 IEGVKAQNRE IDQLDKKKEH LLARKKVIEE LQSNRSQMVH LFDSLARTIP DGVVLTTIKQ 120
  121 EGNSLTLQGR SQSNVRVSTY MRNIEGSGWM TNPDLSIIEA KEQDKNTLID SRALPYVFTI 180
  181 KAKLSKPESP DKARHRPISP NSGKASASSS ADFKPLSEDN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	43	0.97
Non-Cytoplasmic	44	220	0.99