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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57222251, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.54
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLISINCV QLLITALFYT CISCSSVEQK IYVELNKTAP CVRLLNATHQ IGCQSSISGD  60
   61 TGVVHVLESE SDLDWILSAG PHPPYMVIME TAFFNRSVML SMKNSSRVAG VAVIISKAGL 120
  121 AEHFSPHTTC PNQNTGVYSA GSEFANCNGT VWNPLGNGLS YEDFTFPVFA LKDENQTQVI 180
  181 RKCYEDHNLR VNGSAPQYPL CAMQLFSHMH AVTDTVTCMR RTDLQNKFSI NPEILCDPLS 240
  241 DYNVWTSIRP LNNSARGHAE NESVVIAAVR LDGRSFFWEE APAAEGTVSA IVTLLAAIHA 300
  301 LYPVIQEAPP LRNIFFTFFQ GEAFDYIGSS RMVFDMERNQ FVMDLDNVHS MLEIGQVGLR 360
  361 GGRDVWIHSD PVSRRNSSME KQVSEMIKDV NSSAAGLNIN LQEPSVSQPL PPSSFQRFLR 420
  421 VRPIPGLVLT DHEKAFNNRY YESMYDDAEN LNVSYPPNLT PDEQLVYPTD AAKSLAEVAT 480
  481 LVARSLYTQA GGEQNNLSNI TADATMVSQL LYGFLVQKNN SWFRSLLPPE ITKKGGSSIL 540
  541 SSGPPQFYIG LGPRLQSPVH SVTLFVQYIL ANLTGNVTNL TESQCQNPKE LSGENKDLYS 600
  601 YFWVSGPSSG NSSADPLCVR ASVRLSKAVS PAFELLQYGS SDYSTWTESR WKSIRARIFL 660
  661 VASRELEMLT LGVGVAVLLL SLLVTYFISS KAELLFSSAR ETPTTTY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle