YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54261696, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.92
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGGVLLLL AACFGPAFSL YFHIGETEKK CFIEEIPDET MVVGNYRTQM FDKQREDYLP  60
   61 ATPGLGMFVE VKDPDDKVIL SRQYGSEGRF TFTSHTPGEH QICLHSNSTK FALFAGGMLR 120
  121 VHLDIQVGEH ANDYVDIAAK DKLNTLQLRV RQLIEQVEQI QKEQNYQRWR EERFRQTSES 180
  181 TSQRVLWWSI AQTLILVTIG VWQMKHLKGF FEAKKLV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	184	0.99
Transmembrane Helix	185	204	0.88
Cytoplasmic	205	217	0.86