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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32527755, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLQQKNQE SGSCLGHKCG CLSSPELVLQ SSRISGELQV FSLCWNAEEG FNSSHSDGIN  60
   61 ELARESEGKE GKSQAFFFPV FLFRLPLRVV FVGAFLQQPD SQCWFYESTG TADPVMLATH 120
  121 YSELSTDSKK RKQSFTNLLG GSWGLDGLVQ EQRPLAITQD KITAAAQDDI SLQLSEAEAS 180
  181 HDSTACNLSA GKADLGPRLE LADQPAELKP GSRFGTSGID IIDGDPLRRD RKDNSKERHG 240
  241 GYFENIEWCK KGNIMLQKNS LQNINWPLKR LCTRFPCSTV AGSIFPVPYW FVTGRISQDD 300
  301 HLNRATAGSG TEFGGLLRAA GAAAAAAAGA FGECPGLMLP FRLLAAVVRI GYRFCLRLSS 360
  361 PQVPRVFSDL SSPPPPQDHG LWLQKSFPSE GIWLITEPQT NQVGPWESFE MSGFDNLNSG 420
  421 FYQTSYSIDE QSQQSYDYGG SGGPYSKQYA GCEYSQQGRF VPPDMMQPQQ TYTGQIYQPT 480
  481 QAYPPPTPQT FYGDSFEEEP PLLEELGINF DHIWQKTLTV LHPLRASDGS IMNETDLAGP 540
  541 VVFCLAFGAT LLLAGKIQFG YVYGISAIGC LGMFCLLNLM SMTVQLYHLE AFGLVADMIS 600
  601 KYIGSCGEWN AGMFKWREAL KAVEPPKNAK CWPFSQGGSP SANNAEAGKQ LEGTN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle