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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32527731
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLSRWLRSL GVFLLPAPCW APRERWLGYL QRPSLAYGCP VLGAWHSARW WCQVWTEEPR  60
   61 AFSSSVRMNG DQKLDVHNQE KQNFIQHFSQ IVKVLTEDEL GHPEKGDAIT RIKEVLEYNT 120
  121 VGGKYNRGLT VVQTFQELVE PRKQDAESLQ RALTVGWCVE LLQAFFLVLD DIMDSSHTRR 180
  181 GQICWYQKPG IGLDAINDAL LLEAAIYRLL KFYCREQPYY LNLLELFLQS SYQTEIGQTL 240
  241 DLITAPQGQV DLGRYTEKRY KSIVKYKTAF YSFYLPIAAA MYMAGIDGEK EHANALKILL 300
  301 EMGEFFQIQE NYGQKDPEKV ARVKALYEEL DLRSVFFKYE EDSYNRLKSL IEQCSAPLPP 360
  361 SIFLELANKI YKRRNSCSDL SPDESPVSVY SRDLPGNEDA NPQASIFPLE LGSPLAPAVR 420
  421 SSWSFAGVPG AQRLWMAEAQ SGTGQLQEQK KGLLIAVSAS VDKIISHFGA ARNLVQKAQL 480
  481 GDSRLSPDVG HLVLTTLCPA LHALVADGLK PFRKDLITGQ RRSSPWSVVE ASVKPGSCTH 540
  541 SMGSLYSQVS RLAPLSSSRS RFHAFILGLL NTKQLELWFS TLQEDAGLLS LLYLPTGFFS 600
  601 LARGSCPSLA TELLLLLQPL SVLTFHLDLL FEHHHHLPLG LQQAPAPSGP PPALQQTMQA 660
  661 VLHWGGRLAQ TLRGTSGEAT TDSSTPSTRP PPGSWWDQLT QASRVYASGG TEGFPLLRWG 720
  721 PRRNGTTAEG TQEAPPPTEQ TTPGRSVWLG RLFGVPGCSS ETDSGAFKSR RPSSWLPPTV 780
  781 SVLALVKRGT PPEVPPEEPV KEPACMVQAD RAVRALCDHT AAGPDQLSFQ RGEVLRVIST 840
  841 VDEDWLRCGR DGVEGLVPTA VSVADGARIK TRTMEAQPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle