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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32527717
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRRPETPC RFRVLWATTM AMSFEWPWQY RFPPFFTLQP NVDTRQKQLA AWCSLVLSFC  60
   61 RLHKQSSMTV MEAQESPLFN NVKLQRKLPV ESIQIVLEEL RKKGICFAGN LEWLDKNKSS 120
  121 FLIMWRRPEE WGKLIYQWVS RSGQNNSVFT LYELTSGEDT EEEAPRNTET GVHMSQTEAD 180
  181 LALRPSPSLT SMGPTRLGPP PRRVRRFSGK AEPRPRSSRP SRRSSVDLGL LSSWSQPASL 240
  241 LPEPPDPPDS AGPMRSPPSN SKEHPEGTWT GAAPVKAADS ACPELTVSSG GPGSREPPRV 300
  301 PDAAARERRR EQEEKEDTET QAVATSPDGR YLKFDIEIGR GSFKTVYRGL DTDTTVEVAW 360
  361 CELQTRKLSR AERQRFSEEV EMLKGLQHPN IVRFYDSWKS VLRGQVCIVL VTELMTSGTL 420
  421 KTYLRRFREM KPRVLQRWSR QILRGLHFLH SRVPPILHRD LKCDNVFITG PSGSVKIGDL 480
  481 GLATLKRASF AKSVIGTPEF MAPEMYEEKY DEAVDVYAFG MCMLEMATSE YPYSECQNAA 540
  541 QIYRKVTSGT KPNSFYKVKM PEVKEIIEGC IRTDKNERFT IQDLLTHAFF REERGVHVEL 600
  601 AEEDDGEKPG LKLWLRMEDA RRGGRPRDNQ AIEFLFQLGR DAAEEVAQEM VALGLVCEAD 660
  661 YQPVARAVRE RVAAIQRKRE KLRKARELEV LPPDSGPPPA TVSMTPGPPS AFPPEPEEPE 720
  721 ADQHQSFLFR HASYSSTTSD CETDGYLSSS GFLDASDPAL QPPGGMPSSP AEPHLCLPSV 780
  781 FALSIPRSGP GSDFSPGDMY VLVSVRWQAT PQMQPQALSD MGEGGQMRKN PVKTLRRRPR 840
  841 SRLRVTSVSD QSDRVVECQL QTHNSKMVTF RFDLDGDSPE EIAAAMVYNE FILPSERDGF 900
  901 LSRIREIIQR VETLLKRDAG PSEATEDALS PQEEPAAMPA LPGPSDEGKP QLVGRFQVTS 960
  961 SKEPAEPPLQ PASPTLSRSL KLPTPQLTSE SSDTEDSAAG GPETREALAE SDRAAEGLGV1020
 1021 AIDEEKDEGK EPQIGGSSPI LSQPSPVWMN YSYSSLCLSS EESESSGEDE EFWAELQNLR1080
 1081 QKHLSEVEAL QTLQKKEIED LYSRLGKQPP PGIVAPAAML SCRQRRLSKG SFPTSRRNSL1140
 1141 QRSDLPGPGI MRRNSLSGSS TGSQEQRASK GVTFAGDVGR MVRGEDKLIG REGGIQGVTE1200
 1201 DSGNKLKKPV YGSRELCKCS ERVLNMEGPL RPRLVNCSDF QFGVVATETI ENALLHLAQQ1260
 1261 NEQAVKEAAG RSGSFRETRI VEFVFLLSEQ WCLEKSVSYQ AVEILERFMV KQAENICQQA1320
 1321 TLQLRSNELQ SWRALKEQLS NKFILRLVSC VQLASKLSFH YKIVSNITVL NFLQALGYGY1380
 1381 TKEELLESEL DILKSLNFQI NLPTPLAYVE MLLEVLGYNG CLVPATQLHA TCLTLLDLVY1440
 1441 LLHEPIYESL LRASIENSPP SQLQGEKFIS VKEDFMLLAV GIIAASAFIQ NHECWSQVIG1500
 1501 HLQSITGIAS ESIAEFSYAI LTHSVGANTP GQQHPVPHKA ARALRTAASS NT

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