YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP9_CANAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLALAAKYI GASIATLGLG GAAIGIALVF VALINGTSRN PSLRSTLFPQ AILGFALSEA  60
   61 CGLFCLMISF LLLYAV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.69
Transmembrane Helix	10	34	0.89
Non-Cytoplasmic	35	50	0.68
Transmembrane Helix	51	74	0.92
Cytoplasmic	75	76	0.63