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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16304010
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLADIVLDL AAIASASRSV ASKHVALRAR QINRFGKSSS LTTRPTTAAP STSASASEPA  60
   61 KAQTVTTAPA TTDNAARAPI PKAAETAARV QPSSDAGQDA GGAAAVLGRD RPVAPWATRD 120
  121 GLFATAPRTP RRSLFESAPA KLGEVDATTA EGMPEGININ IFQTSRGSKI LESLKSDADV 180
  181 DNGATKDATR ITDTKEGAKA SESTRFESLA AEEPKRESEL ANKPLQSPEA SEMRSTTKAY 240
  241 AADPVTFTPP PVSTPKSSPA AENVVQDSAP AASGYQLRES KVPATRLSRI WNYGGLAAGM 300
  301 LGGALTESIS RGFGGGTSGT SAMLSPANME RLVSKLSRMR GAALKMGQML SFQDAKMLPG 360
  361 PIREVLQRVQ DRADYMPAWQ RDRVLATNLG SEWRDLFETF EEKPIAAASI GQVHRATLKP 420
  421 QEEGSMPVEV AVKIQFPGVA DSINSDLDNL AMLLAATKLL PKGLYLDKTI ANARMELAWE 480
  481 CDYEREAECA QRYRTLLAGD EEAVFAVPRV FPAASGKQVL TMEFMHGIGV TRGIHSFTQE 540
  541 QRDRIGTHIL RLCLREITEF RFMRTDPNWT NFLYNAETGR LELLDFGASR EYPERFVSLY 600
  601 VRLLYAASKG DRECVRVLSE ELGYPTGHES GVMLDAHTQS VLTLAEPFLK SAPELYDFRD 660
  661 QTITERVKSF IPVMIKERLA PPPEETYSLH RKLSGAFLLC ARLGSKVRCR EMFTKSVKKS 720
  721 GLVPEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle