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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MD37B_ARATH
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT  60
   61 YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE RTIFDPKRLI 120
  121 GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF 180
  181 LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI 240
  241 LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK 300
  301 DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME 360
  361 PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP DEAVAYGAAV 420
  421 QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ 480
  481 TTVTINVYEG ERSMTKDNRE LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA 540
  541 KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD 600
  601 KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT 660
  661 EGENEDDDGD DHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle