YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25351710
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.26
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCSSYCTSS EYKMSDLVTN LKKIGLEPQH FDDVLYIRKE INKDSDFIEI FFFPFGCVTI  60
   61 WGGDEIQEKI VLSDTDLVPV NKLKEPVSDY IYFEYNTEVK KTFIDEEKNK IILADKSVFV 120
  121 KLSISHALAQ SVKLSVLEQS VSNLIVQTTP IQQELARTGS VSLSKKEILQ QIGILFNERY 180
  181 SISLHSDIFD TPEFFWRRPS YEPLYLMTAE FQDIEIRQNI MNHRLNMIHE LLNILSNDLN 240
  241 YKHSTKLEWI IIILIGLEVV LSLSHTNLFL KIIGAL

Type	Start	End	Confidence
Non-Cytoplasmic	1	248	0.56
Transmembrane Helix	249	270	0.66
Cytoplasmic	271	276	0.26