YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38704256
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGILMFMA MMVAGRAEAG VALGATRIIY PAGQKQVQLA VTNNDENSTY LIQSWVENAD  60
   61 GVKDGRFIVT PPLFAMKGKK ENTLRILDAT NNQLPQDRES LFWMNVKAIP SMDKSKLTEN 120
  121 TLQLAIISRI KLYYRPAKLA LPPDQAAEKL RFRRSANSLT LINPTPYYLT VTELNAGARV 180
  181 LENALVPPMG ESTVKLPSDA GSNITYRTIN DYGALTPKMT GVME

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	224	0.99