YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25301905, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTNAFCLA SPPLARICLH GDLQRFGRRL SLYVNTAAEA IRALSLQMPG FRRQMNEGWY  60
   61 QIRIRGEDTA PEAVYARLHE PLGEGAVIHI VPRLAGAGKG GLQIVLGAAA IVGSFFTAGA 120
  121 TMALWGAALS AGGLTATTML FSLGASMILG GVAQMLAPKA KTPEYRATDN GKQNTYFSSL 180
  181 DNMIAQGNPM PVPYGEMLVG SRRISQDIST RDEGGDGKVV VIGRG

Type	Start	End	Confidence
Cytoplasmic	1	101	0.98
Transmembrane Helix	102	125	0.88
Non-Cytoplasmic	126	133	0.64
Transmembrane Helix	134	156	0.87
Cytoplasmic	157	225	0.99