YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25296311
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLVLAALL ASCAFGASAA EKINFGVSAT YPPFESMDAN NQIVGFDIDL AKALCKQMQA  60
   61 ECTFTNHAFD SLIPSLKFRK YDAVISGMDI TPDRSKQVSF TTPYYENSAV VIAKKDTYKT 120
  121 FADLKGKRIG MENGTTHQKY IQDQHPEVKT VSYDSYQNAF IDLKNSRIDG VFGDTAVVNE 180
  181 WLKTNPQLGV ATEKVTDPQY FGTGLGIAVR PDNKALLEKL NNALAAIKAD GTYQQISDQW 240
  241 FPQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	243	0.99