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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189363581, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTLKESLV TRSRVFSPWT AFYFLQSLLI NLGLGYPFSL LYTAAFTAIL LLLWRTLPRV  60
   61 QKVLVGVSSL VAACYFPFAQ AYGAPNFNTL LALHSTNMEE STEILTIFPW YSYLVGLFIF 120
  121 ALGVIAIRRK KENEKARWNT FDSLCLVFSV ATFFVAPVQN LAWGGVFKLK DTGYPVFRFA 180
  181 KDVIVNNNEV IEEQERMAKL SGMKDTWTVT AVKPKYQTYV VVIGESARRD ALGAFGGHWD 240
  241 NTPFASSVNG LIFADYIAAS GSTQKSLGLT LNRVVDGKPQ FQDNFVTLAN RAGFQTWWFS 300
  301 NQGQIGEYDT AIASIAKRAD EVYFLKEGNF EADKNTKDEA LLDMTAQVLA QEHSQPQLIV 360
  361 LHLMGSHPQA CDRTKGKYET FVQSKETSCY LYTMTQTDDL LRKLYDQLRN SGSSFSLVYF 420
  421 SDHGLAFKER GKDVQYLAHD DKYQQNFQVP FMVISSDDKA HRVIKARRSA NDFLGFFSQW 480
  481 TGIKAKEINI KYPFISEKKA GPIYITNFQL QKVDYNHLGT DIFDPKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle