YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189371086, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPLVKKTVS ALFVSTLLAS APAFADIIIS GTRIIYNADK KDVNVRLENK GNRPLLIQNW  60
   61 LDTGDDNADP SQIKVPFTAT PPVSRVEPKR GQTVKVMYTG ATALPKDRES VYWFNVLEVP 120
  121 PKPKDAEADK NLLQLAFRTR IKLFYRPSGL QGEPAEAPAK ITWKLNNAQL QANNPTPYYV 180
  181 SFNEVKLESG GKTYNVNSSM VTPFSQASFG VTSLPGSVSS GKVVFKAIND FGGNIDGSAT 240
  241 F

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	241	0.99