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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6460730, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPRSGPRPA ASARRDARQR DPRQLRRLLA YARPYRLPFV LGVLATLISS GLGLVFPRLF  60
   61 GTLIDASFLK VGSTDTGPLD RTVLSLLGIF ALSACFGAAQ AYLLARVGAG VVADLRRALF 120
  121 SHLLSLSPRF FGNHRTGDLT SRLTSDVGTV QAVTSTALAQ LASQGFTLIG SVLLLVQTSP 180
  181 RLSLLTLAII PLVIGTAVTI GRRIRRVSRE VQDAVAAANG QAEEAISGVR VVQSFTAEGL 240
  241 EEERYGQGVL ASFRAALRRA RLQALMTGVM SFLTFGALAL VLWFGGRQVM SGALTPGNLV 300
  301 TFLFYALQVG GTVAALTGVF NQFQEALGAS SRIFELLDER SDLPGPAAPR PLSRAEGRVR 360
  361 FVDVGFTYAG APALQDITFD VPAGQVVALV GPSGAGKTTL VNLIPRFWDV TAGRVEVDGH 420
  421 DVRAYALADL RRQVGLVPQE TLLFSGTVAE NILYGRPGAS QAEVEAAAHA AHAHEFICEL 480
  481 EGGYGAVVGE RGVKLSGGQR QRVAIARAIL KDPRILILDE ATSALDNESE ALVQAALERL 540
  541 MVGRTTFVVA HRLSTIRSAD RILVMDAGRV VADGTHEGLM AAGGLYRELY ELQFRQQQEA 600
  601 RR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle