YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7471251
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWTRDEMAA RAAQELQDGY YVNLGIGLPT LVANHIPAGM SVWLQSENGL LGIGPFPTED  60
   61 EVDPDLINAG KQTVTALPGA SFFSSADSFA MIRGGHVNLA ILGAMQVSET GDLANWMIPG 120
  121 KMVKGMGGAM DLVAGVQRVV VLMEHVAKGD AHKILRECTL PLTGQGVVDR IITDLGVLDV 180
  181 TPQGLKLVEL APGVTLDELR QKTGADIHE

Type	Start	End	Confidence
Cytoplasmic	1	19	0.63
Transmembrane Helix	20	39	0.62
Non-Cytoplasmic	40	209	0.75